Proteome Analysis of Walnut Bacterial Blight Disease.
Identifieur interne : 000072 ( Main/Exploration ); précédent : 000071; suivant : 000073Proteome Analysis of Walnut Bacterial Blight Disease.
Auteurs : Cíntia H D Sagawa [États-Unis] ; Renata De A B Assis [États-Unis, Brésil] ; Paulo A. Zaini [États-Unis] ; Phillip A. Wilmarth [États-Unis] ; Brett S. Phinney [États-Unis] ; Leandro M. Moreira [Brésil] ; Abhaya M. Dandekar [États-Unis]Source :
- International journal of molecular sciences [ 1422-0067 ] ; 2020.
Abstract
The interaction between the plant host, walnut (Juglans regia; Jr), and a deadly pathogen (Xanthomonas arboricola pv. juglandis 417; Xaj) can lead to walnut bacterial blight (WB), which depletes walnut productivity by degrading the nut quality. Here, we dissect this pathosystem using tandem mass tag quantitative proteomics. Walnut hull tissues inoculated with Xaj were compared to mock-inoculated tissues, and 3972 proteins were identified, of which 3296 are from Jr and 676 from Xaj. Proteins with differential abundance include oxidoreductases, proteases, and enzymes involved in energy metabolism and amino acid interconversion pathways. Defense responses and plant hormone biosynthesis were also increased. Xaj proteins detected in infected tissues demonstrate its ability to adapt to the host microenvironment, limiting iron availability, coping with copper toxicity, and maintaining energy and intermediary metabolism. Secreted proteases and extracellular secretion apparatus such as type IV pilus for twitching motility and type III secretion effectors indicate putative factors recognized by the host. Taken together, these results suggest intense degradation processes, oxidative stress, and general arrest of the biosynthetic metabolism in infected nuts. Our results provide insights into molecular mechanisms and highlight potential molecular tools for early detection and disease control strategies.
DOI: 10.3390/ijms21207453
PubMed: 33050347
PubMed Central: PMC7593943
Affiliations:
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Zaini</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Sciences, University of California, Davis, CA 95616, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Sciences, University of California, Davis, CA 95616</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Wilmarth, Phillip A" sort="Wilmarth, Phillip A" uniqKey="Wilmarth P" first="Phillip A" last="Wilmarth">Phillip A. Wilmarth</name><affiliation wicri:level="2"><nlm:affiliation>Proteomics Shared Resource, Oregon Health and Science University, Portland, OR 97239, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Proteomics Shared Resource, Oregon Health and Science University, Portland, OR 97239</wicri:regionArea><placeName><region type="state">Oregon</region></placeName></affiliation></author><author><name sortKey="Phinney, Brett S" sort="Phinney, Brett S" uniqKey="Phinney B" first="Brett S" last="Phinney">Brett S. Phinney</name><affiliation wicri:level="2"><nlm:affiliation>Proteomics Core Facility, University of California, Davis, CA 95616, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Proteomics Core Facility, University of California, Davis, CA 95616</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author><author><name sortKey="Moreira, Leandro M" sort="Moreira, Leandro M" uniqKey="Moreira L" first="Leandro M" last="Moreira">Leandro M. Moreira</name><affiliation wicri:level="1"><nlm:affiliation>Departamento de Ciências Biológicas, Instituto de Ciências Exatas e Biológicas, Núcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Ouro Preto 35400-000, Brazil.</nlm:affiliation><country xml:lang="fr">Brésil</country><wicri:regionArea>Departamento de Ciências Biológicas, Instituto de Ciências Exatas e Biológicas, Núcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Ouro Preto 35400-000</wicri:regionArea><wicri:noRegion>Ouro Preto 35400-000</wicri:noRegion></affiliation></author><author><name sortKey="Dandekar, Abhaya M" sort="Dandekar, Abhaya M" uniqKey="Dandekar A" first="Abhaya M" last="Dandekar">Abhaya M. Dandekar</name><affiliation wicri:level="2"><nlm:affiliation>Department of Plant Sciences, University of California, Davis, CA 95616, USA.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Plant Sciences, University of California, Davis, CA 95616</wicri:regionArea><placeName><region type="state">Californie</region></placeName></affiliation></author></analytic><series><title level="j">International journal of molecular sciences</title><idno type="eISSN">1422-0067</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">The interaction between the plant host, walnut (<i>Juglans regia</i>; Jr), and a deadly pathogen (<i>Xanthomonas arboricola</i> pv. <i>juglandis</i> 417; Xaj) can lead to walnut bacterial blight (WB), which depletes walnut productivity by degrading the nut quality. Here, we dissect this pathosystem using tandem mass tag quantitative proteomics. Walnut hull tissues inoculated with Xaj were compared to mock-inoculated tissues, and 3972 proteins were identified, of which 3296 are from Jr and 676 from Xaj. Proteins with differential abundance include oxidoreductases, proteases, and enzymes involved in energy metabolism and amino acid interconversion pathways. Defense responses and plant hormone biosynthesis were also increased. Xaj proteins detected in infected tissues demonstrate its ability to adapt to the host microenvironment, limiting iron availability, coping with copper toxicity, and maintaining energy and intermediary metabolism. Secreted proteases and extracellular secretion apparatus such as type IV pilus for twitching motility and type III secretion effectors indicate putative factors recognized by the host. Taken together, these results suggest intense degradation processes, oxidative stress, and general arrest of the biosynthetic metabolism in infected nuts. Our results provide insights into molecular mechanisms and highlight potential molecular tools for early detection and disease control strategies.</div></front></TEI><pubmed><MedlineCitation Status="In-Process" Owner="NLM"><PMID Version="1">33050347</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>31</Day></DateRevised><Article PubModel="Electronic"><Journal><ISSN IssnType="Electronic">1422-0067</ISSN><JournalIssue CitedMedium="Internet"><Volume>21</Volume><Issue>20</Issue><PubDate><Year>2020</Year><Month>Oct</Month><Day>09</Day></PubDate></JournalIssue><Title>International journal of molecular sciences</Title><ISOAbbreviation>Int J Mol Sci</ISOAbbreviation></Journal><ArticleTitle>Proteome Analysis of Walnut Bacterial Blight Disease.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">E7453</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.3390/ijms21207453</ELocationID><Abstract><AbstractText>The interaction between the plant host, walnut (<i>Juglans regia</i>; Jr), and a deadly pathogen (<i>Xanthomonas arboricola</i> pv. <i>juglandis</i> 417; Xaj) can lead to walnut bacterial blight (WB), which depletes walnut productivity by degrading the nut quality. Here, we dissect this pathosystem using tandem mass tag quantitative proteomics. Walnut hull tissues inoculated with Xaj were compared to mock-inoculated tissues, and 3972 proteins were identified, of which 3296 are from Jr and 676 from Xaj. Proteins with differential abundance include oxidoreductases, proteases, and enzymes involved in energy metabolism and amino acid interconversion pathways. Defense responses and plant hormone biosynthesis were also increased. Xaj proteins detected in infected tissues demonstrate its ability to adapt to the host microenvironment, limiting iron availability, coping with copper toxicity, and maintaining energy and intermediary metabolism. Secreted proteases and extracellular secretion apparatus such as type IV pilus for twitching motility and type III secretion effectors indicate putative factors recognized by the host. Taken together, these results suggest intense degradation processes, oxidative stress, and general arrest of the biosynthetic metabolism in infected nuts. Our results provide insights into molecular mechanisms and highlight potential molecular tools for early detection and disease control strategies.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>H D Sagawa</LastName><ForeName>Cíntia</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>Department of Plant Sciences, University of California, Davis, CA 95616, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>de A B Assis</LastName><ForeName>Renata</ForeName><Initials>R</Initials><Identifier Source="ORCID">0000-0002-2075-9319</Identifier><AffiliationInfo><Affiliation>Department of Plant Sciences, University of California, Davis, CA 95616, USA.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Departamento de Ciências Biológicas, Instituto de Ciências Exatas e Biológicas, Núcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Ouro Preto 35400-000, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zaini</LastName><ForeName>Paulo A</ForeName><Initials>PA</Initials><AffiliationInfo><Affiliation>Department of Plant Sciences, University of California, Davis, CA 95616, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Wilmarth</LastName><ForeName>Phillip A</ForeName><Initials>PA</Initials><AffiliationInfo><Affiliation>Proteomics Shared Resource, Oregon Health and Science University, Portland, OR 97239, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Phinney</LastName><ForeName>Brett S</ForeName><Initials>BS</Initials><Identifier Source="ORCID">0000-0003-3870-3302</Identifier><AffiliationInfo><Affiliation>Proteomics Core Facility, University of California, Davis, CA 95616, USA.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Moreira</LastName><ForeName>Leandro M</ForeName><Initials>LM</Initials><Identifier Source="ORCID">0000-0003-3870-8453</Identifier><AffiliationInfo><Affiliation>Departamento de Ciências Biológicas, Instituto de Ciências Exatas e Biológicas, Núcleo de Pesquisas em Ciências Biológicas, Universidade Federal de Ouro Preto, Ouro Preto 35400-000, Brazil.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dandekar</LastName><ForeName>Abhaya M</ForeName><Initials>AM</Initials><Identifier Source="ORCID">0000-0001-7925-4086</Identifier><AffiliationInfo><Affiliation>Department of Plant Sciences, University of California, Davis, CA 95616, USA.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><GrantList CompleteYN="Y"><Grant><GrantID>D-0420-07-0</GrantID><Agency>California Walnut Board</Agency><Country></Country></Grant></GrantList><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>10</Month><Day>09</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Int J Mol Sci</MedlineTA><NlmUniqueID>101092791</NlmUniqueID><ISSNLinking>1422-0067</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">LC-MS/MS</Keyword><Keyword MajorTopicYN="N">Xanthomonas</Keyword><Keyword MajorTopicYN="N">adaptation</Keyword><Keyword MajorTopicYN="N">disease susceptibility</Keyword><Keyword MajorTopicYN="N">fruit</Keyword><Keyword MajorTopicYN="N">proteomics</Keyword><Keyword MajorTopicYN="N">virulence</Keyword><Keyword MajorTopicYN="N">walnut blight</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2020</Year><Month>09</Month><Day>13</Day></PubMedPubDate><PubMedPubDate PubStatus="revised"><Year>2020</Year><Month>10</Month><Day>01</Day></PubMedPubDate><PubMedPubDate 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